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Supplementary Data to: "Cysteine-mediated structural stabilization of the tet... Dataset
Simulation files, molecular structures and trajectories tetrameric GlpF wild type and M4C mutant. in the latter, 4 cysteine residues in the transmembrane helix bundle of GlpF,... -
MD Simulations with PRDM9 Dataset
This data collection contains additional data related to Graf et al.: "Investigation and design of the dual specificity of the PRDM9 protein lysine methyltransferase". This... -
NGS data related to Sogl et al. "Systematic analysis of specificities and fla... Dataset
Analysis of flanking sequence preference with a randomized substrate and bioinformatic data For analysis of the flanking sequence preference, substrate with different target... -
Supplementary Data for 'Vastly different energy landscapes of the membrane in... Dataset
Simulation files, molecular structures and trajectories, and jupyter notebooks used for analysis underlaying our publication on membrane insertion of monomeric gasdermin D to E.... -
HPLC raw data related to Koeppl et al.: Structure, function and substrate pre... Dataset
In this study, synthesis and cleavage reactions catalysed by S-adenosyl-L-homocysteine hydrolases originating from different domains of life were investigated. The reactions... -
Data for: 'EnzymeML-based modeling workflow: from raw data to kinetic paramet... Dataset
Kinetic parameter estimates for small laccase (SLAC) catalyzed oxidation of ABTS, investigated across the temperature range between 25 °C and 45°C. This dataset contains the... -
Additional data related to Weirich et al.: Discovery of new NSD2 non-histone ... Dataset
This data collection contains additional data related to Weirich et al.: "Discovery of new NSD2 non-histone substrates and design of a super-substrate". This includes Modelled... -
Data for: Tracking the activity and position of mitochondrial beta-barrel pro... Dataset
Total interference reflection fluorescence microscopy (TIRF) of lipid bilayers is an effective technique for studying the lateral motion and ion channel activity of individual... -
NGS data related to Dossmann et al.: Specific DNMT3C flanking sequence prefer... Dataset
Cloning and site-directed mutagenesis The gene of the catalytic, C-terminal domain of murine DNMT3C (amino acid residues 439-740 of P0DOY1) was obtained in E. coli codon... -
NGS data related to Adam et al.: On the accuracy of the epigenetic copy machi... Dataset
Expression and purification of DNMT1 for biochemical work Full length murine DNMT1 (UniProtKB P13864) was overexpressed and purified as described (Adam, et al. 2020) using the... -
Additional data related to Khella et al.: The T1150A cancer mutant of the pro... Dataset
This data collection contains additional data related to Khellaet al.: "The T1150A cancer mutant of the protein lysine methyltransferase NSD2 can introduce H3K36... -
QSDB - a graphical Quorum Sensing Database: VANTED add-on source code Dataset
The add-on had been designed for the VANTED framework and used to create QSDB Database's collection of clickable networks. Each network is laid out according to SBGN standards,... -
NGS data related to Dukatz et al.: DNA methyltransferase DNMT3A forms interac... Dataset
The naming of the files is described in the Supplemental Tables 1 of the accompanying manuscript. -
Catalysis of L-cysteine by IscS in the presence of IscU Dataset
Measured was the reaction from cysteine to alanine by the Cysteine desulfurase, for six different initial concentrations of cysteine. The data consists of three data points over... -
Carboligation of Pyruvate catalysed by HcAHAS C Unit Dataset
The data was measured in the course of a Bachelor thesis and filled into the EnzymeML Spreadsheet. Measured was the absorption for the reaction from pyruvate to acetolactate.... -
Deactivation of Glucose Oxidase Dataset
The data is unpublished and contains absorption data over time, together with the calculated initial rates. Reaction conditions and the experimental setup are described in the... -
Synthesis and Hydrolysis of Cephalexin Dataset
Investigated was the synthesis and hydrolysis of cephalexin, and the hydrolysis of phenylglycine methyl ester by an amino ester hydrolase. The concentrations of all reactants... -
Oxidation of ABTS by Trametes versicolor laccase Dataset
Investigated was the oxidation of ABTS and syringaldazine by Trametes versicolor laccase. For this, the concentration of the substrate over time was measured, for different... -
Propioin Synthesis using Benzoin Aldolase Dataset
Investigated was the ligation of two molecules propanal in organic conditions, catalysed by the benzoin aldolase, which was added in the form of lyophillised whole cells. The... -
Data related to "Preferential interaction of DNMT3A subunits containing the R... Dataset
Methylation of substrate libraries Single-stranded DNA oligonucleotides used for generation of double stranded substrates with a distance of 12 base pairs between CpG sites were...
